rs888115 chr17:57584109 T>C
- Sequence
taaataatgagctccagactgtgc[T/C]gccccctgtccgcagtagcctcct
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.19 | n/a | 1.67 | 0.99 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP body mass index (bmi), irritible bowel syndrome, late onset alzheimers disease, spine bone mineral density (bmd)