rs888117 chr17:57573954 G>A
- Sequence
gagtaggacttataagccaagtac[G/A]tggtggtggttgtgacgataatga
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.98 | -0.97 | 2.00 | 2.03 | Discordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, ldl cholesterol change with statins, rheumatoid arthritis, stabilized warfarin dose, total cholesterol change with statins