rs888246 chr11:116853516 C>T

Sequence
cacaatgcacgccacccaccttcc[C/T]ggggaactttggggcaacctgcac
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.83 n/a 1.9·10-41.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad),  cystatin c in serum,  hdl cholesterol,  ldl cholesterol,  total cholesterol,  triglycerides
GTEx eQTL Artery_Tibial,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis

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