rs888839 chr19:47227561 G>C
- Sequence
ggaaaccaggacacactttcccta[G/C]agcgcctgccggcagggatggggc
- ASB in cell types
- HEK293 (embryonic kidney) breast tumor primary B-CLL cells
- ASB for transcription factors
- ESR1_HUMAN PATZ1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.17 | n/a | 2.00 | n/a | No Hit | |||
| PATZ1_HUMAN | -2.53 | 1.66 | 1.50 | 1.33 | Weak Concordant |
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Motif analysis
