rs891689 chr4:150961146 A>C

Sequence
tggctgtggctgtagatgagattc[A/C]gctgtgggtggcctcagctcacca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.96 0.38 5.9·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Whole_Blood

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