rs893344 chr2:11872939 A>T
- Sequence
catggtggacagtgtctgttatgt[A/T]tccaaaatgattgttgttggagac
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TF65_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.55 | 0.79 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.04 | 0.17 | 2.00 | 2.27 | Discordant |
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Motif analysis
