rs893349 chr2:11742525 T>C

Sequence
atggcgactcagaggactgactca[T/C]ggtgatatgcggggtctttttgtt
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -3.12 2.66 1.003.6·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Putamen_basal_ganglia Colon_Transverse Heart_Atrial_Appendage Lung Nerve_Tibial Pancreas Spleen Stomach Thyroid Whole_Blood

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