rs893365 chr3:53807119 C>T
- Sequence
gctgcagggggattccctcctcct[C/T]cagagagtgttgtgcagagcacat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 1.01 | 0.46 | 1.17 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Colon_Transverse, Kidney_Cortex, Liver, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Thyroid