rs894768 chr18:50697288 T>C
- Sequence
ctttactcatctgtaaaataggaa[T/C]aagaacagcaaacctaccggcgta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- TBX21_HUMAN MEF2B_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -2.33 | 2.67 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -3.52 | 2.13 | 1.50 | 1.38 | Weak Concordant | |||
| CTCF_HUMAN | 0.16 | 1.93 | 1.11 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
