rs894905 chr4:54355782 T>C

Sequence
aggtgaggaggggaatggatctga[T/C]taaagggatgttcaagaaaggaaa
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.77 -0.42 9.9·10-71.00 1.53 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad),  irritible bowel syndrome,  ldl cholesterol,  total cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia

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