ADASTRA v6.1.0
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rs895074
chr3:122975553
C
>
T
Sequence
agtcagttctctcaaccgtaaaac[C/T]acacagggcagttgtgaagattaa
ASB in cell types
HKC8 (kidney proximal tubule cell line)
HL-60 (acute myeloid leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
22RV1 (prostate carcinoma)
ASB for transcription factors
SKI_HUMAN
EPAS1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SKI_HUMAN
2.33
n/a
4.2·10
-3
1.00
2.00
n/a
n/a
EPAS1_HUMAN
1.25
-0.89
0.04
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
infant head circumference
,
lp-pla2 mass
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)