rs896321 chr1:205288028 C>G

Sequence
actctcttaatggaaagagcttct[C/G]agagcttcccaagctgactagagg
ASB in cell types
MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.50 n/a 5.3·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP waist hip ratio
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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