rs897 chr3:42536811 T>C

Sequence
gactgaagatgcagctcactaccc[T/C]attctctctttacgcttagttatc
ASB in cell types
foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.64 1.16 1.000.05 1.24 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP infant head circumference,  premature ovarian failure,  tetrology of fallot,  transmission distortion,  variant creutzfeldt-jakob disease
GTEx eQTL Brain_Putamen_basal_ganglia,  Muscle_Skeletal,  Nerve_Tibial,  Testis

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