rs897323 chr3:125289761 C>T

Sequence
ccatggaaatgtagcatgtggcaa[C/T]aaaaaagaggaactctttttagca
ASB in cell types
macrophages form periferal blood MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 0.88 1.89 0.335.5·10-4 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol change with statins,  height,  ldl cholesterol,  mitral annular calcium,  refractive error
GTEx eQTL Colon_Sigmoid,  Esophagus_Muscularis,  Nerve_Tibial,  Pituitary,  Thyroid

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