rs899049 chr20:54067667 G>C
- Sequence
gattaataataggccctcctcctg[G/C]aaacaggccaaacgccaaacccca
- ASB in cell types
- breast tumor T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.18 | 0.38 | 1.43 | 3.04 | Discordant | |||
| ARI1B_HUMAN | 3.03 | -5.54 | 2.00 | n/a | n/a |
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Motif analysis
