rs899546 chr5:180831750 C>T
- Sequence
cggtccgcagggcaccttcctcct[C/T]tctctcaggcacgtcctcgacctc
- ASB in cell types
- CD14+ monocytes HEK293T (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN PRDM9_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.01 | 0.25 | 1.67 | n/a | No Hit | |||
| PRDM9_HUMAN | 1.96 | -1.45 | 1.00 | n/a | No Hit |
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