rs901128 chr15:74244739 G>C
- Sequence
gccacgtctatgcccacctcacgg[G/C]tctcacttcttccagaaaggcgcc
- ASB in cell types
- J-Lat A72
- ASB for transcription factors
- SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | -0.39 | 1.86 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Mucosa, Lung, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Testis