rs903603 chr9:27529318 G>A

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.59 0.78 0.920.02 1.17 n/a No Hit
STAG1_HUMAN 0.75 1.66 1.000.03 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP amyotrophic lateral sclerosis (als),  amyotrophic lateral sclerosis (als) with >2 c9orf72 hexanucleotide repeats,  amyotrophic lateral sclerosis (als) with c9orf72 hexanucleotide repeat mutations,  amyotrophic lateral sclerosis (als) with n=7-23 c9orf72 hexanucleotide repeats,  amyotrophic lateral sclerosis (als) without c9orf72 hexanucleotide repeat mutations,  hdl cholesterol,  hdl cholesterol change with statins,  neuroblastoma (brain cancer),  number of c9orf72 hexanucleotide repeats in amyotrophic lateral sclerosis (als) patients,  sporadic amyotrophic lateral sclerosis (als)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Amygdala,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Hippocampus,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Breast_Mammary_Tissue,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Spleen,  Stomach,  Testis,  Thyroid,  Whole_Blood

Download