ADASTRA v6.1.0
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rs904979
chr4:7218920
C
>
T
Sequence
ccacagatcttactgcactgcccg[C/T]aggcactctgccctgaaacacagt
ASB in cell types
MDA-MB-231ERb(triple negative breast cancer)
BEAS-2B (bronchial epithelium)
ASB for transcription factors
ESR2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR2_HUMAN
2.42
-0.04
6.0·10
-4
0.90
2.00
-0.31
Weak Concordant
Items per page:
5
1 – 1 of 1
Motif analysis
ESR2_HUMAN
Weak Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
cystatin c in serum
,
ldl cholesterol
,
serum creatinine
GTEx eQTL
Adipose_Visceral_Omentum
,
Esophagus_Mucosa
,
Lung
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
Go to motif analysis