rs905097 chr5:42168341 T>C

Sequence
gctgggccagcacttcaatgttct[T/C]ggcacttctggatcactagcatct
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GRHL2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN -0.38 2.34 1.009.8·10-4 1.92 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) aortic valve calcium biploar disorder (bipolar schizoaffective disorder) height
GTEx eQTL Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Thyroid

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