rs905884 chr10:75236146 T>G
- Sequence
tggccgcgccgggaactgcgcccc[T/G]gcggggagcaggccaagcgcctag
- ASB in cell types
- HepG2 (hepatoblastoma) epidermal keratinocytes 22RV1 (prostate carcinoma) LNCaP clone FGC
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 0.25 | 1.34 | 1.08 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
