ADASTRA v6.1.0
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rs908241
chr17:80861878
G
>
A
Sequence
tggtgaaaggggacagccttcctc[G/A]taccttcctcgtgacattctcact
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.17
0.51
7.4·10
-5
1.00
1.29
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
college completion
,
cystatin c in serum
,
nicotine dependence (smoking)
,
serum creatinine
,
years of education
GTEx eQTL
Nerve_Tibial
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)