rs908511 chr12:38906939 T>C

Sequence
agtttttgcggtggaggacttgcc[T/C]tgcgttgtaacattttaatccact
ASB in cell types
Peyer's patch HUVEC-C (HUVEC, umbilical vein endothelial cells) vagina
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -1.74 2.14 1.004.2·10-4 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale,  bipolar disorder,  colorword,  eur students <30 colorword,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Colon_Transverse,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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