rs909669 chr22:40346413 C>T
- Sequence
ggcagaagcagcggagattctccg[C/T]agccggcagcgcccagggcgcccg
- ASB in cell types
- HEK293 (embryonic kidney) primary B-CLL cells foreskin keratinocyte adult erythroblasts
- ASB for transcription factors
- RBBP5_HUMAN CTCF_HUMAN BRD4_HUMAN SP7_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | 3.20 | n/a | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.52 | 0.43 | 1.46 | n/a | No Hit | |||
| BRD4_HUMAN | 1.66 | 0.55 | 1.20 | n/a | n/a | |||
| SP7_HUMAN | -4.65 | 2.55 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Testis, Thyroid, Whole_Blood