rs912337 chr13:98489018 C>T

Sequence
cggggtcacagacttccttaagag[C/T]gtgagtttttgtaaaaggtacctt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.13 -1.64 3.5·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) college completion hdl cholesterol triglycerides years of education
GTEx eQTL Adipose_Subcutaneous Colon_Transverse Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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