rs917191 chr7:80941555 G>C
- Sequence
tgccataaaggaattgtcatatga[G/C]ccttgacacacaaattccacaact
- ASB in cell types
- HT29 (colon adenocarcinoma) HASM2 (Human airway smooth muscle 2) hMADS-3 (adipose-derived stem cells)
- ASB for transcription factors
- PPARG_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PPARG_HUMAN | -0.23 | 2.53 | 1.64 | 5.37 | Concordant | |||
| GCR_HUMAN | -0.24 | 1.17 | 1.11 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
