rs921319 chr2:62140585 T>C

Sequence
gccataattgtctctcatggcaac[T/C]caactgtatgcaacattgaaccat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN -1.86 1.86 1.003.9·10-4 1.00 n/a No Hit
IKZF2_HUMAN -0.53 1.84 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus fasting insulin homa-b homa-ir paternal transmission distortion transmission distortion
GTEx eQTL Cells_Cultured_fibroblasts Colon_Transverse Heart_Left_Ventricle Thyroid

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