rs922049 chr8:9363570 C>A

Sequence
ggggttacattattcaaaagagta[C/A]aagtggagcctgcgaagggggagt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 2.81 -1.82 8.7·10-41.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI neuroticism
GRASP diastolic blood pressure (dbp),  hdl cholesterol,  obesity with early age of onset (age >2),  systolic blood pressure (sbp),  total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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