ADASTRA v6.1.0
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rs9221
chr17:48598451
C
>
T
Sequence
tctccttcgcctttctcctctctc[C/T]ccccaacaacacaacgcgtcctgt
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HS-SY-2(Monophasic synovial sarcoma)
0.78
1.43
0.46
0.05
1.70
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
irritible bowel syndrome
,
ldl cholesterol
,
obesity with early age of onset (age >2)
,
partial epilepsy
,
refractive error
,
tetrology of fallot
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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log2-scale