rs922667 chr17:35186004 A>T
- Sequence
ggtcttgtgctgtgtcatagcatg[A/T]tttagaagcagaaggggaagtgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TBX21_HUMAN MTA2_HUMAN MEF2B_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 2.53 | -2.20 | 1.00 | n/a | No Hit | |||
| MTA2_HUMAN | 2.42 | -2.15 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 1.47 | -1.47 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.22 | -0.22 | 1.00 | n/a | n/a |
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