rs923198 chr6:158825685 C>T

Sequence
accattccctgagcatattttgtg[C/T]ttaggatttctgtgctttctcttc
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.75 0.85 2.9·10-45.6·10-7 1.03
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Motif analysis

No data available

Genetic associations

EMBL-EBI brown vs. black hair color
GRASP fasting blood glucose,  ldl cholesterol,  transmission distortion,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Liver,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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