rs9266544 chr6:31374275 G>A
- Sequence
tgttccttgacacttttcgctacc[G/A]ctagaccacggttcgcctggcaac
- ASB in cell types
- GM17942 (lymphoblastoid cell) 22RV1 (prostate carcinoma) GM12891 (male B- cells lymphoblastoid cell line) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.89 | -0.96 | 4.09 | 1.30 | Weak Discordant |
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Motif analysis
