rs9267315 chr6:31492070 A>T
- Sequence
ggcttcagccccacccatgcagta[A/T]cactgtgccctgtccttccaacca
- ASB in cell types
- RWPE1 (prostate epithelial cells) GM19240 (B cells Lymphoblastoid Cell Lines) IPSC-derived bipolar neuron HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.64 | 0.00 | 1.52 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Esophagus_Mucosa, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood