rs9276996 chr6:33018058 T>C
- Sequence
tctccctagcttccaccctcatct[T/C]tcttctttactcttcccatgttcc
- ASB in cell types
- THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.47 | 1.27 | 1.56 | 2.80 | Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, chronic kidney disease, infant head circumference, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Spleen