rs9277023 chr6:33030094 C>T
- Sequence
agtaacctctgaatccacggtctc[C/T]agcactccctcctgctcccatccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM18486 (Lymphoblastoid Cell Lines) TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN TRI22_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.36 | 1.82 | 1.89 | n/a | No Hit | |||
| STAG1_HUMAN | -0.03 | 2.15 | 2.40 | n/a | n/a | |||
| TRI22_HUMAN | -0.92 | 2.33 | 1.00 | n/a | n/a | |||
| ITF2_HUMAN | -0.42 | 2.91 | 1.83 | n/a | No Hit | |||
| HIF1A_HUMAN | n/a | 2.76 | 2.00 | n/a | No Hit |
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