rs9277024 chr6:33030100 T>A
- Sequence
ctctgaatccacggtctccagcac[T/A]ccctcctgctcccatccccaggtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM18486 (Lymphoblastoid Cell Lines) TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN TRI22_HUMAN ITF2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.23 | 1.69 | 1.83 | n/a | No Hit | |||
| STAG1_HUMAN | 0.29 | 2.09 | 2.40 | n/a | n/a | |||
| TRI22_HUMAN | -0.86 | 2.32 | 1.00 | n/a | n/a | |||
| ITF2_HUMAN | -0.39 | 2.53 | 1.83 | n/a | No Hit | |||
| BRD4_HUMAN | 1.76 | -2.97 | 2.00 | n/a | n/a |
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