rs927728 chr1:94463929 G>T
- Sequence
atcttgctgtgaaatgtgcacacc[G/T]attttatttccaacactgtatttt
- ASB in cell types
- THP-1 (acute monocytic leukemia) sigmoid colon adrenal gland thoracic aorta
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 0.40 | 1.37 | n/a | No Hit | |||
| RAD21_HUMAN | 1.22 | 0.24 | 1.81 | n/a | n/a | |||
| SMC3_HUMAN | 1.61 | -0.01 | 1.71 | n/a | n/a |
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