rs9283865 chr6:166383232 T>C
- Sequence
ccagcggggacgtggaggtgacat[T/C]tctctgacccacaggactgtgggc
- ASB in cell types
- monocytes from periferal blood BEAS-2B (bronchial epithelium) GM19239 (male B-cells lymphoblastoid cell line) A549 (lung carcinoma)
- ASB for transcription factors
- SRBP2_HUMAN ZN282_HUMAN GCR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | -1.94 | 3.06 | 2.00 | n/a | No Hit | |||
| ZN282_HUMAN | 2.84 | -2.58 | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.11 | 0.30 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood