rs9285505 chr6:144893970 A>G
- Sequence
ggtgggaaagataaataactaaat[A/G]taagagcatgtcagggctatggga
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 LN95(Prostate adenocarcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HXB13_HUMAN A2NVP9_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.82 | 0.05 | 1.76 | -3.17 | Concordant | |||
| ANDR_HUMAN | 1.69 | -0.15 | 1.73 | -2.21 | Concordant | |||
| HXB13_HUMAN | 2.06 | 0.40 | 1.60 | n/a | No Hit | |||
| A2NVP9_HUMAN | 1.87 | -0.95 | 1.50 | n/a | n/a |
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Motif analysis
