rs9287428 chr2:133438497 T>C
- Sequence
cagttatttgcacataatgctagt[T/C]actaatacagagctgtagataact
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.00 | 1.62 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, eye color, premature ovarian failure, type 2 diabetes