rs9287734 chr2:11584349 A>G
- Sequence
ggcggggatgactcattggagtgg[A/G]tgcgctgctctgtacttgattttt
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) prostate gland HMEC (human mammary epithelial cells)
- ASB for transcription factors
- EGR1_HUMAN SMCA4_HUMAN SP130_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -0.17 | 2.14 | 1.62 | 3.39 | Concordant | |||
| SMCA4_HUMAN | 0.87 | 1.40 | 1.45 | n/a | n/a | |||
| SP130_HUMAN | 2.66 | -1.87 | 2.00 | n/a | n/a |
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Motif analysis
