rs9292003 chr5:53001744 G>A
- Sequence
gtcccagctacgccggaggatgag[G/A]caagaggatcatttgagcctaaga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- TEAD3_HUMAN TEAD1_HUMAN NR2F6_HUMAN ARI4B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD3_HUMAN | 2.40 | -2.10 | 1.00 | n/a | No Hit | |||
| TEAD1_HUMAN | 2.81 | -2.61 | 1.00 | n/a | No Hit | |||
| NR2F6_HUMAN | 2.07 | -0.11 | 1.50 | n/a | No Hit | |||
| ARI4B_HUMAN | 2.82 | n/a | 1.00 | n/a | n/a | |||
| HM20A_HUMAN | 2.98 | n/a | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Thyroid