rs9292116 chr5:56458288 T>C

Sequence
gagataagaagctcccgccagcaa[T/C]ttcagtgtccctggcccaatttag
ASB in cell types
K562 (myelogenous leukemia) SK-N-SH (neuroblastoma)
ASB for transcription factors
IKZF1_HUMAN EP300_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN n/a 2.24 1.001.1·10-3 2.00 n/a n/a
EP300_HUMAN 2.51 n/a 1.7·10-31.00 1.38 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale hdl cholesterol refractive error
GTEx eQTL Brain_Cerebellar_Hemisphere

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