rs9297000 chr6:16033454 C>T
- Sequence
aatgaccttgttctgcatgcagcc[C/T]ccaccagcatgaccttataaaact
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN COT1_HUMAN ARNT_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | n/a | 3.07 | 1.00 | n/a | No Hit | |||
| COT1_HUMAN | -2.03 | 2.42 | 1.00 | n/a | No Hit | |||
| ARNT_HUMAN | -2.48 | 2.73 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.04 | 2.01 | 1.25 | n/a | n/a | |||
| TADBP_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 6