rs930041 chr10:78303517 A>C
- Sequence
ccatcgcgcatgcgcgtcctccag[A/C]gcgctcccttggcagccagcccgc
- ASB in cell types
- 22RV1 (prostate carcinoma) erythroid progenitors HUVEC-C (HUVEC, umbilical vein endothelial cells) sigmoid colon
- ASB for transcription factors
- TYY1_HUMAN ANDR_HUMAN NRF1_HUMAN NFIC_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -4.79 | 4.07 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | -0.24 | 3.04 | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | 1.06 | 0.69 | 1.45 | n/a | No Hit | |||
| NFIC_HUMAN | -0.16 | 0.59 | 1.67 | n/a | No Hit | |||
| NFIB_HUMAN | -1.13 | 1.34 | 1.00 | n/a | No Hit |
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Motif analysis
