rs931011 chr1:240027210 A>T
- Sequence
aatccactgaggtcaggttttttt[A/T]aaaaaaaacaaagatcaacaggaa
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) hepatocytes HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.75 | 0.44 | 1.39 | n/a | No Hit | |||
| SMC3_HUMAN | 1.26 | -0.12 | 1.88 | n/a | n/a |
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