rs931410 chr8:110894635 A>G

Sequence
tcagggtcagcagcttaactcttc[A/G]tctctgggcacaagcagagccatg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MTG16_HUMAN ATF3_HUMAN NCOR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG16_HUMAN n/a 4.31 1.001.5·10-8 2.00 n/a n/a
ATF3_HUMAN n/a 3.82 1.006.3·10-8 2.00 n/a No Hit
NCOR1_HUMAN -1.54 2.31 1.000.01 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  ldl cholesterol,  total cholesterol

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