rs931812 chr8:100907093 C>T

Sequence
atgttacccatatgggcaaaggct[C/T]gcgtcacagcttctctgtgtcttg
ASB in cell types
U937 (adult acute monocytic leukemia) primary B-CLL cells
ASB for transcription factors
CEBPA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPA_HUMAN n/a 3.12 1.005.4·10-3 2.00 5.56 Concordant
Items per page:
1 – 1 of 1

Motif analysis

CEBPA_HUMAN Concordant
CEBPA_HUMAN pic

Genetic associations

EMBL-EBI attention deficit hyperactivity disorder and conduct disorder
GRASP body mass index (bmi),  categorical,  cystatin c in serum,  microalbuminuria,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid,  Whole_Blood

Download