rs932189 chr2:127408065 C>A
- Sequence
cgccttccccctcctcgtctcccc[C/A]ctccccgcccgcgccgtctgcgtc
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line) CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- JUN_HUMAN CDN1B_HUMAN STAT1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 0.01 | 3.03 | 1.17 | n/a | No Hit | |||
| CDN1B_HUMAN | -0.74 | 2.36 | 1.20 | n/a | n/a | |||
| STAT1_HUMAN | n/a | 3.85 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 3.27 | 3.00 | n/a | No Hit | |||
| ANDR_HUMAN | n/a | 3.00 | 2.50 | n/a | No Hit |
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