rs932402 chr1:6423523 G>A

Sequence
catggagagagtgagggcgatctg[G/A]cctggtggaagtcgttggaaaccc
ASB in cell types
Ishikawa (endometrial adenocarcinoma) KMS-11 (Plasma cell myeloma)
ASB for transcription factors
ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.54 2.46 1.001.3·10-10 2.31 6.38 Concordant
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Motif analysis

ESR1_HUMAN Concordant
ESR1_HUMAN pic

Genetic associations

GRASP infant head circumference
GTEx eQTL Breast_Mammary_Tissue Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Whole_Blood

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